USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9P000 USC-OGP 2-DE database:  Q9P000 Q9P000 General information about the entry View entry in simple text format Entry name COMD9_HUMAN Primary accession number Q9P000 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=COMM domain-containing protein 9;. Gene name Name=COMMD9 ORFNames=HSPC166 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1311: pI=5.46; Mw=22114 Cross-references UniProtKB/Swiss-Prot Q9P000; COMD9_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name COMD9_HUMAN Primary accession number Q9P000 Secondary accession number(s) E9PAN2 Q96FI2 Q9H0R0 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  March 15, 2017 (version 117) Name and origin of the protein Description RecName: Full=COMM domain-containing protein 9; Gene name Name=COMMD9 ORFNames=HSPC166 Encoded on Name=COMMD9; ORFNames=HSPC166 Keywords 3D-structure; Acetylation; Alternative splicing; Complete proteome; Cytoplasmic vesicle; Ion transport; Nucleus; Reference proteome; Sodium; Sodium transport; Transcription; Transcription regulation; Transport; Ubl conjugation pathway. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AY542164; AAS22246.1; -; mRNA EMBL AF161515; AAF29130.1; -; mRNA EMBL AL136688; CAB66623.1; -; mRNA EMBL AC087277; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL BC010892; AAH10892.1; -; mRNA CCDS CCDS44571.1; -. [Q9P000-2]; . CCDS CCDS7900.1; -. [Q9P000-1]; . RefSeq NP_001294866.1; NM_001307937.1; . RefSeq NP_054905.2; NM_014186.3. [Q9P000-1]; . UniGene Hs.279836; -; . PDB 4NKN; X-ray; 2.79 A; A/B/C/D/E/F=1-116 PDB 4OE9; X-ray; 1.55 A; A/B=1-117 PDBsum 4NKN; -; . PDBsum 4OE9; -; . ProteinModelPortal Q9P000; -; . SMR Q9P000; -; . BioGrid 118867; 20; . IntAct Q9P000; 9; . STRING 9606.ENSP00000263401; -; . iPTMnet Q9P000; -; . PhosphoSitePlus Q9P000; -; . SwissPalm Q9P000; -; . BioMuta COMMD9; -; . DMDM 124056492; -; . EPD Q9P000; -; . MaxQB Q9P000; -; . PaxDb Q9P000; -; . PeptideAtlas Q9P000; -; . PRIDE Q9P000; -; . DNASU 29099; -; . Ensembl ENST00000263401; ENSP00000263401; ENSG00000110442. [Q9P000-1]; . Ensembl ENST00000452374; ENSP00000392510; ENSG00000110442. [Q9P000-2]; . GeneID 29099; -; . KEGG hsa:29099; -; . UCSC uc001mwn.5; human. [Q9P000-1]; . CTD 29099; -; . GeneCards COMMD9; -; . HGNC HGNC:25014; COMMD9; . HPA HPA009142; -; . MIM 612299; gene; . neXtProt NX_Q9P000; -; . OpenTargets ENSG00000110442; -; . PharmGKB PA134930445; -; . eggNOG ENOG410II5T; Eukaryota; . eggNOG ENOG4111H94; LUCA; . GeneTree ENSGT00390000006218; -; . HOGENOM HOG000232004; -; . HOVERGEN HBG080522; -; . InParanoid Q9P000; -; . OMA VSTWRTE; -; . OrthoDB EOG091G1AK9; -; . PhylomeDB Q9P000; -; . TreeFam TF323880; -; . Reactome R-HSA-6798695; Neutrophil degranulation; . ChiTaRS COMMD9; human; . GeneWiki COMMD9; -; . GenomeRNAi 29099; -; . PRO PR:Q9P000; -; . Proteomes UP000005640; Chromosome 11; . Bgee ENSG00000110442; -; . CleanEx HS_COMMD9; -; . ExpressionAtlas Q9P000; baseline and differential; . Genevisible Q9P000; HS; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0005576; C:extracellular region; TAS:Reactome; . GO GO:1904813; C:ficolin-1-rich granule lumen; TAS:Reactome; . GO GO:0005794; C:Golgi apparatus; IDA:HPA; . GO GO:0005634; C:nucleus; IDA:HPA; . GO GO:0034774; C:secretory granule lumen; TAS:Reactome; . GO GO:0043312; P:neutrophil degranulation; TAS:Reactome; . GO GO:0006355; P:regulation of transcription; DNA-templated; IEA:UniProtKB-KW GO GO:0006814; P:sodium ion transport; IEA:UniProtKB-KW; . GO GO:0006351; P:transcription; DNA-templated; IEA:UniProtKB-KW InterPro IPR017920; COMM; . Pfam PF07258; COMM_domain; 1; . PROSITE PS51269; COMM; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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